Abstract #274
Section: ADSA Multidisciplinary and International Leadership Keynote (MILK) Symposium
Session: ADSA Multidisciplinary and International Leadership (MILK) Symposium: The Dairy Cow in 50 Years
Format: Oral
Day/Time: Tuesday 10:15 AM–10:45 AM
Location: 301/302
Presentation is being recorded
Session: ADSA Multidisciplinary and International Leadership (MILK) Symposium: The Dairy Cow in 50 Years
Format: Oral
Day/Time: Tuesday 10:15 AM–10:45 AM
Location: 301/302
Presentation is being recorded
# 274
Possibilities in an age of genomics: The future of the breeding index.
J. B. Cole*1, 1Animal Genomics and Improvement Laboratory, ARS, USDA, Beltsville, MD.
Key Words: dairy cattle, genetic improvement, selection index
Speaker Bio
Possibilities in an age of genomics: The future of the breeding index.
J. B. Cole*1, 1Animal Genomics and Improvement Laboratory, ARS, USDA, Beltsville, MD.
Selective breeding has been practiced since domestication, but early breeders commonly selected on appearance (e.g., coat color) rather than quantitative phenotypes (e.g., milk yield). A breeding index converts information about several traits into 1 number used for selection and also to predict an animal’s own performance. Calculation of selection indices is straightforward when phenotype and pedigree data are available. Prediction of economic values 3 to 10 years in the future, when the offspring of matings planned using the index will be lactating, is more challenging. The first USDA selection index included only milk and fat yield, while the latest version of the lifetime net merit (LNM) index includes 13 traits, with some traits actually composites of other traits. Selection indices are revised to reflect improved knowledge of biology, new sources of data, and changing economic conditions. Single-trait selection often suffers from antagonistic correlations with traits not in the selection objective. Multiple-trait selection avoids those problems at the cost of less-than-maximal progress for individual traits. How many and which traits to include is not simple to determine because traits are not independent. Many countries use indices that reflect the needs of different producers in different environments. While the emphasis placed on trait groups differs, most indices include yield, fertility, health, and type traits. Addition of milk composition, feed intake, and other traits is possible but are more costly to collect, and many are not yet directly rewarded in the marketplace, such as with incentives from milk processing plants. As the number of traits grows there is increasing interest in custom selection indices for closely matching genotypes to the environments in which they will perform. Traditional selection required recording lots of cows across many farms, but genomic selection favors collecting more detailed information from cooperating farms. A similar strategy may be useful in less developed countries. Recording important new traits on a small fraction of cows can quickly benefit the whole population through genomics. Gene editing may be used to increase the frequency of high-value Mendelian traits, such as polled.
Key Words: dairy cattle, genetic improvement, selection index
Speaker Bio
Dr. Cole is the acting research leader of USDA's Animal Genomics and Improvement Laboratory in Beltsville, MD, where his reseach focuses on genetic improvement of health and welfare in dairy cattle, optimal use of genomic information in breeding programs, and discovery of causal variants associated with recessive defects and complex traits in cattle. He was responsible for introducing genetic evaluations for stillbirth in the US, as well as developing the first dystocia evaluation to include data from crossbred animals. His team also is responsible for the economic selection indices used to rank dairy bulls and cows. Recent work from his group has focused on mating strategies including information about recessive defects, identification of genomic regions associated with cow fertility and resistance to heat stress, and genomic evaluation of cow health using data recorded by farmers. He was awarded the 2015 Jay L. Lush Award in Animal Breeding and Genetics by the American Dairy Science Association in recognition of his contributions to dairy cattle genetics. As a member of the International Committee for Animal Recording’s Functional Traits Working Group he plays an important role in the development of international standards for data collection and genetic evaluation.